SE3320207

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7672
  • citrus sinensis
  • SE3320207
  • Mutator
  • M47
  • chr7:11444102-11444243
  • CTATTTGTG
  • GGGGTTTGCCTACCTTACGTTTAACGTAAGGTACAACCCTCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTATTTGT    -T    C           T      A     AA       ACACAGC     -   A    - TA
        GGGG  TTGC TACCTTACGTT AACGTA GGTAC  CCCTCTC       TAAGA AGT GGTC C  
        ||||  |||| ||||||||||| |||||| |||||  |||||||       ||||| ||| |||| |   
        CCCC  GACG ATGGAATGCAA TTGCAT CCATG  GGGAGAG       ATTTT TTA CCAG G  
 TGTTTAT    TC    -           T      G     CC       -------     G   C    A TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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