SE3320213

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7678
  • citrus sinensis
  • SE3320213
  • Mutator
  • M37
  • chr5:2100643-2100784
  • TTATTATTA
  • TATTAGGGAGCTGCTACCTTACATGCACGTAAGGTACAGCCCTCTCACAAAACT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAT  T     -AGC                              C        AA  CAGAT       CCA
    TA TAGGG    TGCTACCTTACATGCACGTAAGGTACAGCC TCTCACAA  CT     GTGGGTC   
    || |||||    |||||||||||||||||||||||||||||| ||||||||  ||     |||||||   C
    AT ATTCC    ACGATGGAATGTACGTGCATTCCATGTCGG AGAGTGTT  GA     CACCCGG   
 ATT  T     GAAA                              -        CC  ----C       ATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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