SE3320214

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7679
  • citrus sinensis
  • SE3320214
  • Mutator
  • M11
  • chr5:4953166-4953306
  • TTAATTCAT
  • ATGGATTACTCTATGTTACGTTGAACGTAACATACACACACTCACAGCAACAGTAACGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAATTC        ---  ----            G                               ---  C  GCC
       ATGGATTA   CT    CTATGTTACGTT AACGTAACATACACACACTCACAGCAACAGT   AA GG   
       ||||||||   ||    |||||||||||| |||||||||||||||||||||||||||||||   || ||    
       TACTTAAT   GG    GATACAATGCAA TTGCATTGTATGTGTGTGAGTGTTGTTGTTA   TT CC   
               TCC  TCAC            G                               CGA  A  ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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