SE3320217

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7682
  • citrus sinensis
  • SE3320217
  • Mutator
  • M39
  • chr7:21793844-21794031
  • TATATATAT
  • ATATATATGGCTATGGCTATGTTGGAGTTTATTTATGGTGGAGTACGAATTTTAACTATACACGTAAAATGATAAATATTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
T          -CTA   C                                     A             A         T    AAAAATATTA
 ATATATATGG    TGG TATGTTGGAGTTTATTTATGGTGGAGTACGAATTTTA CTATACACGTAAA TGATAAATA TAAA          
 ||||||||||    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||           
 TATATATATC    GCC ATACAATCTTAAATAGATGCCACCTCATGCTTAGAGT GGTGTGTGCGTTT ACTATTTAT ATTT          
           CCAA   A                                     C             C         T    ATTACTCAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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