SE3320229

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7694
  • citrus sinensis
  • SE3320229
  • Mutator
  • M16
  • chr6:4862626-4862765
  • TTGAATAAA
  • AAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGAATA    CCAG                C             -        C       ---    GTC
       AAGG    TGCTACGTTACGTTAA CGTAACGTATGTC ACACACAG AACAGTA   GTGG   
       ||||    |||||||||||||||| ||||||||||||| |||||||| |||||||   ||||    
       TTCC    GCGATGTAATGCAATT GCATTGCATGTAG TGTGTGTC TTGTCAT   TACC   
AAATAAG    TAGG                A             G        A       GGA    ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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