SE3320230

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7695
  • citrus sinensis
  • SE3320230
  • Mutator
  • M5
  • chrUn:4156829-4156996
  • TTCAAATAC
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCAAATAC  ATAAAA                                   CC  A      AATT        TTCA     A
         GG      CTGTGGTGCAACTGTGGTACCGTGCCACAGTTGCA  CA CCGTTG    TCCACTTA    AGTGG 
         ||      |||||||||||||||||||||||||||||||||||  || ||||||    ||||||||    ||||| C
         CC      GATGTCACGTTGACACCATGGCACGGTGTCAACGT  GT GGCAAC    AGGTGAGT    TTACC 
CATAAACTT  CAGTCC                                   -A  C      --CT        TTAC     C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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