SE3320243

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7708
  • citrus sinensis
  • SE3320243
  • Mutator
  • M5
  • chr8:10523205-10523363
  • CATAAATAA
  • GGATCAGGCTACGGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGTCGTTGGATGCAGTTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
   CATAAATAA   TCA G  AC                                               -   T   ATAA
            GGA   G CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGTCGTTGGATGC AGT GGA    
            |||   | ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    T
            CCT   T GA  CCACGTTGACACCGTGGCACGGTGTCAATGTAGATTGGCAACCTACG TCA CCT    
AATAAATACCCC   --- G  AT                                               G   -   GGGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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