SE3320266

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7731
  • citrus sinensis
  • SE3320266
  • Mutator
  • M29
  • chr7:11011653-11011798
  • TGATACGAG
  • AGGGGAGCCTCTAAGTTACAATAATTGTAACATACATCCCTCATGTGAACCACACAAAATTGTAGGACCTACAATTTGTGTGGTTCACATGAAGAATGTATGTTACAATTATTGTAACTTAGCATTTGCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TGATACG   G   CCT                           C C                  A      G
        AGG GAG   CTAAGTTACAATAATTGTAACATACAT C TCATGTGAACCACACAAA TTGTAG 
        ||| |||   ||||||||||||||||||||||||||| | |||||||||||||||||| |||||| A
        TCC TTT   GATTCAATGTTATTAACATTGTATGTA G AGTACACTTGGTGTGTTT AACATC 
GAGCATAG   G   -AC                           A A                  -      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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