SE3320278

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7743
  • citrus sinensis
  • SE3320278
  • Mutator
  • M23
  • chr2:11859788-11859946
  • TTGATAATG
  • GGGGTCCAGCTATGGTGCCACAGTTGTATGATACCACAGCTGGATCCAACTATTAAATTTAGTTCTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGATAAT     CC G                     A        C              AA         -    GA
        GGGGT  A CTATGGTGCCACAGTTGTATG TACCACAG TGGATCCAACTATT  ATTTAGTTC TGGT  
        |||||  | ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||| ||||   
        TCCTA  T GATACTATGGTGTCAACATAC ATGGTGTC ACCTAGGTTGGTAA  TAGATCGGG GTCA  
GTAATAGT     TT G                     C        A              CC         T    AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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