SE3320286

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7751
  • citrus sinensis
  • SE3320286
  • Mutator
  • M5
  • chr3:8179247-8179405
  • TAATTTTTA
  • TTAGGATCAGGCTACGGTACAACTGTGGTACTGTGCCACAATTGCATTCAGCCGTTGGATGCACTTGGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTT     ATC     -AC   AC                    A          C          ACT      GG
      TTAGG   AGGCT   GGT  AACTGTGGTACTGTGCCACA TTGCATTCAG CGTTGGATGC   TGGATT  
      |||||   |||||   |||  |||||||||||||||||||| |||||||||| ||||||||||   ||||||  T
      AATCC   TTTGG   CCA  TTGACACCATGGCACGGTGT AATGTAGGTC GCAACCTACG   ATCTGG  
ATTTTT     -CC     ACA   CA                    C          A          ATC      AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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