SE3320290

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7755
  • citrus sinensis
  • SE3320290
  • Mutator
  • M25
  • chr5:20862237-20862394
  • AAGGTAAAT
  • TGGGTCCGGCTACGGTGCAACGGTGATACGGTATCACCGTTGCATCCAGTCGTTGGATCCACTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAGGTAAA    TCC     C            A                   C              -   T    GAA
        TGGG   GGCTA GGTGCAACGGTG TACGGTATCACCGTTGCAT CAGTCGTTGGATCC ACT GGAT   
        ||||   ||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||    
        ACCT   TTGAT CCACGTTGCCAC ATGCCATAGTGGCAACGTG GTCGGCAACCTAGG TGA CCTA   
TAAATGGA    CTT     A            C                   A              G   -    AGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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