SE3320291

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7756
  • citrus sinensis
  • SE3320291
  • Mutator
  • M53
  • chrUn:41851263-41851420
  • GTATTTTTT
  • TGGAAACGGATTCGGTGCTCAGCTGAGCTTGTGCTAAGTACCAGATTAATAGTCAATAATTATCTTATG

Secondary structure and sequence

TSD    TIR
5'



3' 
GTATTTTT    AAC          C                 A      A                    C   T TG
        TGGA   GGATTCGGTG TCAGCTGAGCTTGTGCT AGTACC GATTAATAGTCAATAATTAT TTA G  
        ||||   |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| ||| |  G
        ATCT   CTTAAGCCAC AGTCGACTCGAACATGA TCGTGG CTAGTTATCAGTTGTTAATA AAT C  
TTTTTTAT    ATT          A                 C      C                    -   T TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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