SE3320300

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7765
  • citrus sinensis
  • SE3320300
  • Mutator
  • M22
  • chr3:15193938-15194096
  • AAGTTCTTA
  • AAGTTCTTAGGGTCCAGCTATGGTGCAACTGTGGTACCATACCACAGCTGCACCCGGCCATTAGATCCAATTATAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
    TT   A    CC                             C       C     C   A         -     GA
 AAG  CTT GGGT  AGCTATGGTGCAACTGTGGTACCATACCA AGCTGCA CCGGC ATT GATCCAATT ATAGT  
 |||  ||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||| |||||   
 TTC  GAA CCCG  TTGATACCACGTTGACACCATGGTATGGT TCGACGT GGTTG TAA CTAGGTTGG TATCA  
A   TT   -    TT                             A       A     T   C         G     AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3