SE3320329

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7794
  • citrus sinensis
  • SE3320329
  • Mutator
  • M6
  • chr1:20072626-20072785
  • TTGATTAAA
  • TTGATTAAAGGACTTGACTAGCTTACAGAATGTGTAAGCTACAGACTGCAGCATCAGCCGTTGGATGTGGAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
         A       A   GCT      A G     GCT   GA  G A -    -A      G  --------   GG   GA
 TTGATTAA GGACTTG CTA   TACAGA T TGTAA   ACA  CT C G CATC  GCCGTT GA        TGT  AGT  
 |||||||| ||||||| |||   |||||| | |||||   |||  || | | ||||  |||||| ||        |||  |||  G
 AATTAGTT CCTGGAC GAT   ATGTCT A ACATT   TGT  GA G C GTAG  TGGTAG CT        ACA  TCG  
A        -       A   ACC      A G     GTT   -A  G G A    GG      G  AGAAGATA   AA   AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3