SE3320333

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7798
  • citrus sinensis
  • SE3320333
  • Mutator
  • M5
  • chrUn:29736752-29736910
  • TAATAAATA
  • TAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATAAA     GAAAC  TA                                               C   -   CCCT
       TAGGG     CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGCCGTTGGATGC AGT GGA    
       |||||     ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    A
       ATCCT     GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGATCGGCAACCTACG TCA CCT    
ATAAATA     AGTCC  TG                                               -   A   AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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