SE3320334

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7799
  • citrus sinensis
  • SE3320334
  • Mutator
  • M9
  • chr9:4522363-4522508
  • ATTATAAAA
  • TTATAAAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 A      AA  CAAA G                                                 T   TGG
  TTATAA  GG    T CTATGTTACAATTAATGTAACATACACACTCAATAACAACCACACAAAT GTG   
  ||||||  ||    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
  AATATT  CC    G GATACAATGTTAATTACATTGTATGTGTGAGTTGTTGTTGGTGTGTTTA TAC   
AA      AC  -TCG G                                                 C   CCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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