SE3320339

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7804
  • citrus sinensis
  • SE3320339
  • Mutator
  • M21
  • chr7:29127112-29127262
  • TAAATGAAA
  • AGGGTCCAACTATGTTGCAACTGTGGTAAGGTACCACAGTTGCTTTCAGCCATTGGATCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAATGAA     CC  C                  A              TT                GCCAAT
        AGGGT  AA TATGTTGCAACTGTGGTA GGTACCACAGTTGC  TCAGCCATTGGATCCA      
        |||||  || |||||||||||||||||| ||||||||||||||  ||||||||||||||||      G
        TCCCG  TT ATACAACGTTGACACCAT CCATGGTGTCAACG  GGTCGGTAACCTAGGT      
AAAGTAAA     TT  A                  A              TT                GTCAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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