SE3360346

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7811
  • citrus sinensis
  • SE3360346
  • Micron
  • Mim1
  • chrUn:23753317-23753498
  • ATATATA
  • ATATATATATATATAGTAGTTTTCTGGTCAGGGATTTTAAAGTACGGGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
               --  T   T                      A          CGGGAAAGCTTTAAAACCACACGGCTTTAAAGGCC
 ATATATATATATAT  AG AGT TTCTGGTCAGGGATTTTAAAGT CGGGAAAGTT                                   
 ||||||||||||||  || ||| |||||||||||||||||||||| ||||||||||                                    
 TATATATATATATA  TC TTA AAGGTCAGTTCTTAAAATTTCA GCCCTTTGGA                                   
A              CC  T   C                      C          AATTTTGGCGTACCAAAATTTCCAAATTTTGACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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