SE3320350

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7815
  • citrus sinensis
  • SE3320350
  • Mutator
  • M60
  • chr4:15792426-15792571
  • TTAATTAAA
  • TTAATTAAAGGGAGTCTCTAAGTTATATTTAATGTAACATACACAATTCATCTCAACCACATGAATTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
         A G    CT                     A                          -    AGG
 TTAATTAA G GAGT  CTAAGTTATATTTAATGTAAC TACACAATTCATCTCAACCACATGAA TTGT   
 |||||||| | ||||  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||   T
 AATTAATT C TTCA  GATTCAATATAAGTTACATTG ATGTGTTAAGTAGAGTTGGTGTATTT AATA   
A        C G    -C                     A                          T    CCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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