SE3320351

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7816
  • citrus sinensis
  • SE3320351
  • Mutator
  • M7
  • chr1:6622700-6622838
  • TTCTCTCTT
  • GGCTTTGGCTAAGTTACGTTAAACGTAACTTACGCCAGATACAGCAACAGTGCTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
  TTCTCTCTT    TT                                A             - T   GAT
           GGCT  GGCTAAGTTACGTTAAACGTAACTTACGCCAG TACAGCAACAGTG C AGT   
           ||||  |||||||||||||||||||||||||||||||| ||||||||||||| | |||    
           TCGG  CCGATTCAATGCAATTTGCATTGAATGCGGTC GTGTCGTTGTCAC G TCA   
TTCTCTCTTCC    --                                A             T T   GGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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