SE3320352

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7817
  • citrus sinensis
  • SE3320352
  • Mutator
  • M22
  • chr8:9174749-9174907
  • AAACTAAAT
  • TGGGTCTAGCTATGGTGCAATTGTGGTACCATACCAAAGCTGCACCTAACCATTGAATTCAGCTATAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAACTAAA    TCT  C                          A           A      A   C    ATA    AT
        TGGG   AG TATGGTGCAATTGTGGTACCATACCA AGCTGCACCTA CCATTG ATT AGCT   GCAC  
        ||||   || |||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||   ||||   
        ACCT   TT ATACCACGTTGACACCATGGTATGGT TCGACGTGGAT GGTAAT TAG TCGA   CGTG  
TAAATCAA    GTT  A                          G           C      C   A    ---    TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3