SE3320354

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7819
  • citrus sinensis
  • SE3320354
  • Mutator
  • M23
  • chr9:1308577-1308735
  • TATTTTTAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTTTA   ACAAAC       A                      C        A     A        C ACAGTT
        AGG      CTATGGT CCACAGTTGTATGGTACCACAG TGGATCCA CTATT GATCTAGC C      
        |||      ||||||| |||||||||||||||||||||| |||||||| ||||| |||||||| |      G
        TCC      GATACCA GGTGTCAACATACCATGGTGTC ACCTAGGT GGTAA CTAGATCG G      
AATTTTTA   CAGGTC       C                      A        C     C        A ACCACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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