SE3320355

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7820
  • citrus sinensis
  • SE3320355
  • Mutator
  • M10
  • chr8:5485064-5485204
  • ATATATATA
  • ATATATATAGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
         A  - AAACC                          C  C              ACAT      G
 ATATATAT GG C     CTATCTTACATGCATGTAAGATACAT CC CTCACATGAATAGT    GTGTGG 
 |||||||| || |     |||||||||||||||||||||||||| || ||||||||||||||    |||||| A
 TATATATA CC G     GATAGAATGTACGTACATTCTATGTA GG GAGTGTACTTATCA    CACACC 
A        C  A --GAA                          A  A              ----      T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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