SE3320368

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7833
  • citrus sinensis
  • SE3320368
  • Mutator
  • M5
  • chr7:15071898-15072056
  • TATATTTTA
  • TAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATATTT     GAAAC                          A   G                    CAG     CCC
       TAGGG     CTGTGGTGCAACTGTGGTACCGTGCC TAG TGCATTCAGCCGTTGGATGC   TGGAT   
       |||||     |||||||||||||||||||||||||| ||| ||||||||||||||||||||   |||||   A
       ATCCT     GATGCCACGTTGACACCATGGCACGG ATC ACGTAGGTCGGCAACCTACG   ACCTA   
ATTTTAT     AGTCC                          C   A                    TGA     ACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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