SE3320374

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7839
  • citrus sinensis
  • SE3320374
  • Mutator
  • M5
  • chr4:6654496-6654653
  • CAGAACTTA
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
CAGAACTTA  AGAAAA                                   C               CAA     CCA
         GG      CTATGGTGCAACGGTGGTACCGTGCCACCGTTGCA CCAGCCGTTGGATCC   TGGAT   
         ||      ||||||||||||||||||||||||||||||||||| |||||||||||||||   |||||    
         CC      GATGCCACGTTGTCACCATGGCACGGTGGCAACGT GGTCGGCAACCTAGG   ACCTA   
ATTCAAGAC  CAGGCC                                   A               TGA     TCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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