SE3320379

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7844
  • citrus sinensis
  • SE3320379
  • Mutator
  • M5
  • chrUn:4156829-4156996
  • GTATTTGAA
  • GGGTCAGGCTACAGTGCAACTGTGGTACCGTGCCACAGTTGCATCAGCCGTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTATTTGAA    C     ACA                                -           -   C  AAATGAATGGGG
         GGGT AGGCT   GTGCAACTGTGGTACCGTGCCACAGTTGCATC AGCCGTTGGAT CCA TC            
         |||| |||||   |||||||||||||||||||||||||||||||| ||||||||||| ||| ||            T
         CCTA TTTGA   CACGTTGACACCATGGCACGGTGTCAACGTGG TTGGCAACTTA AGG TG            
AAGTTTATG    T     CAC                                G           A   -  AATAAGTTCACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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