SE3320384

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7849
  • citrus sinensis
  • SE3320384
  • Mutator
  • M64
  • chr7:1235754-1235884
  • GGATATTGT
  • GGATATTGTTAAGTTACATTTCAAATAATTTACAACCCATATAAAAATAAGTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
   ATA          AC       A       C       ATA       ---------------      TCC
 GG   TTGTTAAGTT  ATTTCAA TAATTTA AACCCAT   AAAATAA               GTGGAT   
 ||   ||||||||||  ||||||| ||||||| |||||||   |||||||               ||||||    
 CC   AACGATTCAA  TAAAGTT ATTGAAT TTGGGTA   TTTTATT               TACCTA   
C  -AA          AA       -       A       -CA       ACATTTTGATCACTG      TCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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