SE3360396

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7861
  • citrus sinensis
  • SE3360396
  • Micron
  • Mim1
  • chrUn:60915717-60915904
  • ATATATA
  • TATATATATATAGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
A           AG  AAATGTTCTAA    A    T             -       A     GCAT        C  --      C    TAAG
 TATATATATAT  AG           TCCG AATT TAAAGTGCGGGAA CGTCCGG AAAAC    AAACCGTG GG  TTTAAG GCTT    
 |||||||||||  ||           |||| |||| ||||||||||||| ||||||| |||||    |||||||| ||  |||||| ||||     
 ATATATATATA  TC           AGGC TTAG ATTTCACGCCCTT GCAGGCC TTTTG    TTTGGCGC CC  AAATTT TGAA    
            AA  ATCAAAAAACC    C    T             T       C     AAAT        -  TA      C    TTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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