SE3320399

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7864
  • citrus sinensis
  • SE3320399
  • Mutator
  • M6
  • chr5:36080629-36080798
  • TTAAAATTA
  • AGGACCTGTCTATGGTACAGATTCTGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAATT     C  T   TGG      T       CAAAC   TC   TCATCCCACCATCCGATCTTCTATTGTTTAGTTTCTCA
        AGGAC TG CTA   TACAGA TCTGTAA     ATC  CCG                                      
        ||||| || |||   |||||| |||||||     |||  |||                                      C
        TCCTG AC GAT   ATGTCT AGACATT     CGA  TGT                                      
ATTAAAAT     A  T   CGA      T       -----   --   CTGACGTCGTAGTCGGCAACCTACACCAACCTTCACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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