SE3320412

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7877
  • citrus sinensis
  • SE3320412
  • Mutator
  • M13
  • chr5:34833697-34833837
  • TTGTTATTA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGTTATT   CTAATG                         C C                  A   TGT
        AGG      CTAAGTTACATGCATGTACCTTACA C CTCTCACATGAATAGTGA TGA   
        |||      ||||||||||||||||||||||||| | |||||||||||||||||| |||   G
        TCC      GATTCAATGTACGTACATGGAATGT G GAGAGTGTACTTATCACT ACT   
ATTATTGT   TAGGGA                         T A                  C   TGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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