SE3320415

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7880
  • citrus sinensis
  • SE3320415
  • Mutator
  • M37
  • chr1:14389909-14390050
  • TTTAAAGTT
  • GGGAGCTGCTACCTTACATGCACGTAAGGTACAGTCCTCTCACAAAACT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAAAGTT   -AGC                            T          AA  CAGAT       CCA
         GGG    TGCTACCTTACATGCACGTAAGGTACAG CCTCTCACAA  CT     GTGGGTC   
         |||    |||||||||||||||||||||||||||| ||||||||||  ||     |||||||   C
         TCC    ACGATGGAATGTACGTGCATTCCATGTC GGAGAGTGTT  GA     CACCCGG   
 TTGAAATT   GAAA                            -          CC  ----C       ATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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