SE3320419

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7884
  • citrus sinensis
  • SE3320419
  • Mutator
  • M16
  • chr9:10803644-10803783
  • TTAAATATA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAATAT   ATCCC    C                     A  C          ACAATTCTT       GAC
        AGG     GCTA GTTACGTTAATCGTAACGTAC TC ACACACAACA         ATGGTGA   
        |||     |||| ||||||||||||||||||||| || ||||||||||         |||||||    
        TCC     CGAT CAATGCAATTAGCATTGCATG AG TGTGTGTTGT         TATCATT   
ATATAAAT   GACCA    A                     C  -          ---------       ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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