SE3320423

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7888
  • citrus sinensis
  • SE3320423
  • Mutator
  • M9
  • chr4:4037405-4037550
  • TTAAATTAA
  • TAAATTAAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A       AGCCC                               T               A     GGA
 TAA TTAAGGG     CTATGTTACATTGAATGTACCATACACAACC ACAAGAACCACACAA TTATG   
 ||| |||||||     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||   C
 ATT AATTCCT     GATACAATGTAACTTACATGGTATGTGTTGG TGTTCTTGGTGTGTT AATAC   
A   A       AAAAC                               T               -     ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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