SE3320448

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7913
  • citrus sinensis
  • SE3320448
  • Mutator
  • M27
  • chr2:615796-615954
  • TACTAAATG
  • TGGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTAAA     AAAAT                    C        TTCA                TCTAA    CTCC
       TGGGG     TTGTGGTGCAACTGTGGTAC GTGTCACA    CATCCAGCTGTTGGAT     TGGA    
       |||||     |||||||||||||||||||| ||||||||    ||||||||||||||||     ||||    A
       ATCCC     GATACCACGTTGACACCATG CACGGTGT    GTAGGTCGGCAACCTA     ATCT    
GTAAATC     AGGCC                    A        CGAC                TATGA    ACTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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