SE3320462

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7927
  • citrus sinensis
  • SE3320462
  • Mutator
  • M67
  • chr7:22850525-22850722
  • ATGAACTTT
  • TGGATAAAGATCCTCTCCTAATCTGAGCTCTCATGAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATGAACTT     A     C       A      G    - A     --------TT   -     CTTGTGTCACCTGTCTTTAAGTGATAGTGTATTGGTAG
        TGGAT AAGAT CTCTCCT ATCTGA CTCT C TGAGT          TTA AAGAT                                      
        ||||| ||||| ||||||| |||||| |||| | |||||          ||| |||||                                       
        ACCTA TTCTA GAGAGGA TAGATT GAGA G ACTCA          CAC CACTA                                      
TTTCAAGT     G     A       A      A    A G     TATTTATGTA   C     ACCATCAATTATTTATTTCTTTCATTTCTTCAATTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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