SE3320467

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7932
  • citrus sinensis
  • SE3320467
  • Mutator
  • M5
  • chrUn:41336370-41336528
  • TTGTCAATG
  • TTGTCAATGGGATCAGGCTACAGTGCAACTGCGGTACCGTGCCACAGTTGCATCTAGCCGTTGGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
     T   T    TC  G  ACA         C    C                    C         CACT      GG
  TTG CAA GGGA  AG CT   GTGCAACTG GGTA CGTGCCACAGTTGCATCTAG CGTTGGATG    TGGATT  
  ||| ||| ||||  || ||   ||||||||| |||| |||||||||||||||||||| |||||||||    ||||||  T
  AAC GTT CCCT  TT GA   CACGTTGAC CCAT GCACGGTGTCAACGTAGGTC GCAACCTAC    ACCTGA  
GT   T   C    --  G  CAC         A    A                    A         AATC      GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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