SE3320481

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7946
  • citrus sinensis
  • SE3320481
  • Mutator
  • M29
  • chr2:6218309-6218454
  • TTTTCTGTA
  • AGGGAGCCTCTAAGTTACAATAATTGTAACATACATTCCTCATGTGAACCACACAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTCTGT   G  CCT                                                ATTATAGG
        AGG AG   CTAAGTTACAATAATTGTAACATACATTCCTCATGTGAACCACACAAA        
        ||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||         
        TCC TT   GATTCAATGTTATTAACATTGTATGTAGGGAGTACACTTGGTGTGTTT        
ATGTCTTT   G  TAC                                                AACACCCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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