SE3320509

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7974
  • citrus sinensis
  • SE3320509
  • Mutator
  • M82
  • chr1:24141378-24141575
  • ATTATAGAA
  • TTATAGAAGGATCAGGATTCTCTCCTGATCTGATCATGTCCTGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
 A      AA   TC      C               A G C      -----AAA       -  TGTTCATTGATAGTTAATAAATAAAAAAATAAAAAAA
  TTATAG  GGA  AGGATT TCTCCTGATCTGATC T T CTGAGC        TAACTCA AT                                     
  ||||||  |||  |||||| ||||||||||||||| | | ||||||        ||||||| ||                                     G
  AATATT  CCT  TTCTAG AGAGGACTAGACTAG A A GACTCG        TAGAAGA GT                                     
AA      -A   TT      T               - G A      AAAAGTTA       T  TACATAAAAAATCACCATCACATACTCATTCTAAGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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