SE3330517

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7982
  • citrus sinensis
  • SE3330517
  • hAT
  • Hat10
  • chr2:2207114-2207302
  • ATACCAAC
  • CAGGGGCG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATACCAAC        --------AA       AACTTTGGTTAAAGGGGCTGGAGTGAATAATGTATATATAGTTTAGAGATATATTTTAATTTCTA
        CAGGGGCG          AGCTGAA                                                                 
        ||||||||          |||||||                                                                 C
        GTCCCCGC          CTCTGAT                                                                 
CAACCATA        CTAGAATTAC       CTCACCCGGTACCGGGACATTTTAAAGTTAAAAAAAATTTATATGTACTACAGGGGATTTAATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3