SE3320524

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7989
  • citrus sinensis
  • SE3320524
  • Mutator
  • M5
  • chr9:17531915-17532072
  • TTATTTTCA
  • TCAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
      TTATTT     GGAAAC           C       CC                        A A   CAATA  CCCA
            TCAGG      CTGTGGTGCAA TGTGGTA  GTGCCACAGTTGCATCCAGCCGTT G TGC     GA    
            |||||      ||||||||||| |||||||  |||||||||||||||||||||||| | |||     ||     
            AGTCC      GATGCCACGTT ACACCAT  TACGGTGTCAACGTAGGTCGGCAA C ACG     CT    
GCTTTTATTCCT     ------           A       AA                        C A   TAAAC  AACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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