SE3320526

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7991
  • citrus sinensis
  • SE3320526
  • Mutator
  • M19
  • chr3:569963-570163
  • TATTTCTCA
  • AGGCTTTTGTTATGTTACATAATCATGTAACATACATGATTATGTAGTAGCCGTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTCTC   CTT           C        G     -                           GAAA              A   TGACAT   TTT
        AGG   TTGTTATGTTA ATAATCAT TAACA TACATGATTATGTAGTAGCCGTTAGAT    ATCTAACGGTTGTG GAA      GAT   
        |||   ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    |||||||||||||| |||      |||    
        TCC   GACAATATAAT TGTTAGTA ATTGT ATGTATTAATATATCGTCGGCAATTTA    TAGGTTGCCAATAC CTT      TTA   
ACTCTTTA   TCT           A        -     T                           AACG              -   TATATT   TTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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