SE3320534

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7999
  • citrus sinensis
  • SE3320534
  • Mutator
  • M7
  • chr5:29785171-29785311
  • TTATAAATA
  • TTATAAATAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
        AAT   ATCACTC        A                 A        A       AACAAGTCC
   TTATA   AGG       TATGTTAC TTAAACGTAACGTACAC CACTCACA CAACAGT         
   |||||   |||       |||||||| ||||||||||||||||| |||||||| |||||||         C
   AATAT   TCC       ATACAATG AATTTGCATTGTATGTG GTGAGTGT GTTGTCA         
ATA     ---   GATCACT        C                 C        C       AGATTACTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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