SE3320551

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8016
  • citrus sinensis
  • SE3320551
  • Mutator
  • M16
  • chr9:7752932-7753071
  • TAATTTTAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTTTA   GAGCTC                    C    AT         AC       ------    T
        AGG      TTACGTTACGTTAATCGTAA GTAC  TCACACACA  AACAGTA      CTCA 
        |||      |||||||||||||||||||| ||||  |||||||||  |||||||      |||| G
        TCC      GATGCAATGCAATTAGCATT CATG  AGTGTGTGT  TTGTCAT      GGGT 
AATTTTAA   GGTCAC                    A    -C         CA       CGCTCA    A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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