SE3220015

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8126
  • Prunus persica
  • SE3220015
  • Mutator
  • PrpM2
  • scaffold_1:32793017-32793207
  • CTAATAGAT
  • CTAATAGATGGGAGATTCTCCAATAAGTATTTAAGTTAAGGATTAGTTACATATTTCTAATTTCGGACGTTGGATTGCATTCATTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
     A   AT                       -AA          A           C        GA              -------        TA
  CTA TAG  GGGAGATTCTCCAATAAGTATTT   GTTAAGGATT GTTACATATTT TAATTTCG  CGTTGGATTGCATT       CATTTTGG  
  ||| |||  |||||||||||||||||||||||   |||||||||| ||||||||||| ||||||||  ||||||||||||||       ||||||||  G
  GAT ATC  CCTTCTAAGAGGTTATTCATAAA   CAATTCCTAA CAATGTATAAA ATTAGAGC  GCAATCTAATGTAA       GTAAAATT  
TA   A   --                       ATA          C           T        TG              ATATAAC        TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3