SE3250017

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8128
  • Prunus persica
  • SE3250017
  • PIF/harbinger
  • PrpP9
  • scaffold_1:25506898-25507270
  • TAA
  • AGAGCATCCACAGTTGGAGGGTGTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA              T           --AATGA    TATGTTAAATATACACCCTTTGTGATCGGAATCACCCACAATGGAGAGGTGTAAACGAGTGTAAATTTGCATCACCACCATGAGATGCAAATTTAGATGCACATATACATTTTTTTTTACATCTCTTGCAGGTGGGATCTACATGAGA
  AGAGCATCCACAGT GGAGGGTGTAT       GGTG                                                                                                                                                    
  |||||||||||||| |||||||||||       ||||                                                                                                                                                    A
  TCTCGTAGGTGTCA CTTCCCACATA       TCAC                                                                                                                                                    
AA              C           AAAGCCC    ATTTCGGTGAAAATGTAGGGGGAATGTGGTGGCCCCCAACAGTTACACTAAAACGAGGTCACCTCTTCTACATTTAGATTTCTACATATTAACTAAAGAAAGTGGAAAAAACGACATCCAGGGTGAAAACAGGCAAAAAAGAGTGTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3