SE3230036

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8147
  • Prunus persica
  • SE3230036
  • hAT
  • Prph7
  • scaffold_1:10124552-10124877
  • ATCTGCAT
  • TGCATCCAATGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATC    TCC         -   ACTAAGGGGCTCGACTGGGCTTTAGTCCAATGCTGATTTTGTAGTTTAGTCTTAATTGTACAACAAAATCCATTGCAATTAAATATTAACCCGCTTATCTTTTAGATCAGTCTATCCTAGCCACCCACATCAGATTTTTT
   TGCA   AATGGCGGA CCT                                                                                                                                            
   ||||   ||||||||| |||                                                                                                                                            T
   ACGT   TTACCGCCT GGT                                                                                                                                            
ACT    CTA         A   CTTTATAAAGATCCCAACCCGATTTAATAAATAAAAAAACCTCTAGTAAATATGGTTCTTAAAAACTCGATTAATTATAATATACCATCCTAATATATATATAAATATCTTTTATACCATCCTAAAGTCACCCATCTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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