SE3220037

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8148
  • Prunus persica
  • SE3220037
  • Mutator
  • PrpM10
  • scaffold_1:1954221-1954381
  • TGATGAGAG
  • GGAGTAATTTTGGTATGTTCTAGGTGTACCATCCAACACATGAGACATGTGGAAATATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TGATGAGA    T      G          GGT          --       A                CTCCAATACACATA
        GGAG AATTTT GTATGTTCTA   GTACCATCCA  ACACATG GACATGTGGAAATATT              
        |||| |||||| ||||||||||   ||||||||||  ||||||| ||||||||||||||||               
        CCTC TTAAAA CATACAAGAT   CATGGTAGGT  TGTGTAT CTGTATACCTTTATAA              
GAGAGTAA    T      A          ---          TA       C                AATAAAAATACAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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