SE3220070

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8181
  • Prunus persica
  • SE3220070
  • Mutator
  • PrpM10
  • scaffold_8:11812752-11812942
  • CACATGTTG
  • ACATGTTGGAGAAATTTTTATAGAGTATACCATGTGGTTGGTGTACTATCTAATACACATAGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
 C      T    A      --    ---GA  A   CA                                 ---      AAATATTTTATTTTTATGT
  ACATGT GGAG AATTTT  TATA     GT TAC  TGTGGTTGGTGTACTATCTAATACACATAGGTC   ACGTAA                   
  |||||| |||| ||||||  ||||     || |||  |||||||||||||||||||||||||||||||||   ||||||                   C
  TGTACA CCTC TTAAAA  ATAT     CA GTG  ACATTGACCACATGGTAGGTTATGTGTATCCAG   ACCTTT                   
GT      -    A      AC    AAAGC  A   AA                                 TAC      ATAAGAGGTTATGTGTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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