SE3250072

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8183
  • Prunus persica
  • SE3250072
  • PIF/harbinger
  • PrpP15
  • scaffold_2:1985065-1985405
  • TAA
  • CCCTCCGTTTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA             ------CAAA     TGAAAATTACATAGAATTTTAAAATGACGTAATTTAGATTTGCATCATTTCAATTTCTGGCAATTGAAGATTTCAGTGTTTGGATTAATGTATGTTGAATTTTGTAAATGGAACTATGAAAATTGTGAAATGACACCTATTT
   CCCTCCGTTTGGA          GGAAT                                                                                                                                              
   |||||||||||||          |||||                                                                                                                                              T
   GGGAGGCAAACCT          ATTGA                                                                                                                                              
AAC             ACTCCCTTTT     GCCTTAAATCGATTTTCAGCCCTTAAACTTTCCTCTTTAACTGTTAAGGGAACAAACCATTGAATTCGCGTCTTAAATAATTTGCTACTCGCCTTTTTAAGCACCTTTAACCCCGTAGTTTAAGGGCTCAAATTAAAGGTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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