SE3220154

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8265
  • Prunus persica
  • SE3220154
  • Mutator
  • PrpM2
  • scaffold_1:43301935-43302131
  • TTAATTGTA
  • TAATTGTAGGGGAATTCTCCAATAAGTATTTAAGTTAAGAATTGGTTACATATTTCTAATCTCAAGGTTGGATTGCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
 T      T     A     C            -AA     G    G                   -AAG            TCATTAGA        TA
  TAATTG AGGGG ATTCT CAATAAGTATTT   GTTAA AATT GTTACATATTTCTAATCTC    GTTGGATTGCAT        TATATTGG  
  |||||| ||||| ||||| ||||||||||||   ||||| |||| |||||||||||||||||||    ||||||||||||        ||||||||  G
  GTTAAT TCCCT TAAGA GTTATTCATAAA   CAATT TTAA CAATGTATAAAGATTAGAG    CAACCTAACGTA        GTATAATT  
AT      -     C     A            ATA     A    A                   CTGA            CATATAAC        TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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